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Development and evaluation of two approaches of visual sensitivity analysis to support epidemiological modeling

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journal contribution
posted on 2022-10-03, 10:25 authored by Erik Rydow, Rita Borgo, Hui FangHui Fang, Thomas Torsney-Weir, Ben Swallow, Thibaud Porphyre, Cagatay Turkay, Min Chen

Computational modeling is a commonly used technology in many scientific disciplines and has played a noticeable role in combating the COVID-19 pandemic. Modeling scientists conduct sensitivity analysis frequently to observe and monitor the behavior of a model during its development and deployment. The traditional algorithmic ranking of sensitivity of different parameters usually does not provide modeling scientists with sufficient information to understand the interactions between different parameters and model outputs, while modeling scientists need to observe a large number of model runs in order to gain actionable information for parameter optimization. To address the above challenge, we developed and compared two visual analytics approaches, namely: algorithm-centric and visualization-assisted , and visualization-centric and algorithm-assisted . We evaluated the two approaches based on a structured analysis of different tasks in visual sensitivity analysis as well as the feedback of domain experts. While the work was carried out in the context of epidemiological modeling, the two approaches developed in this work are directly applicable to a variety of modeling processes featuring time series outputs, and can be extended to work with models with other types of outputs.

Funding

RAMP VIS: Making Visual Analytics an Integral Part of the Technological Infrastructure for Combating COVID-19

UK Research and Innovation

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Scottish Government Rural and Environment Science and Analytical Services Division

Centre of Expertise on Animal Disease Outbreaks (EPIC)

French National Research Agency and Boehringer Ingelheim Animal Health France for support through the IDEXLYON project (ANR-16-IDEX-0005)

Industrial Chair in Veterinary Public Health, as part of Lyon VPH Hub

History

School

  • Science

Department

  • Computer Science

Published in

IEEE Transactions on Visualization and Computer Graphics

Volume

29

Issue

1

Pages

1255 - 1265

Publisher

Institute of Electrical and Electronics Engineers (IEEE)

Version

  • AM (Accepted Manuscript)

Rights holder

© IEEE

Publisher statement

© 2022 IEEE. Personal use of this material is permitted. Permission from IEEE must be obtained for all other uses, in any current or future media, including reprinting/republishing this material for advertising or promotional purposes, creating new collective works, for resale or redistribution to servers or lists, or reuse of any copyrighted component of this work in other works.

Acceptance date

2022-08-08

Publication date

2022-09-29

Copyright date

2022

ISSN

1077-2626

eISSN

1941-0506

Language

  • en

Depositor

Dr Hui Fang. Deposit date: 1 October 2022